Derek Aguiar


HapCompass haplotype assembler

HapCompass is a state-of-the-art haplotype assembler presented at ISMB 2013 and published in Bioinformatics and the Journal of Computational Biology. It is extremely accurate and efficient and the only haplotype assembly algorithm capable of polyploid haplotype assembly.
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Contact Info

Please send mail to

Derek Aguiar
Princeton University
Department of Computer Science
35 Olden Street
Princeton, NJ 08540-5233
daguiar at